BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A09LP1|AL427245
(707 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig600 1375 0.0
>3x_Contig600
Length = 2338
Score = 1375 bits (691), Expect = 0.0
Identities = 701/707 (99%)
Strand = Plus / Plus
Query: 1 gatctattaaagaaagttcaagaggctttaccagaagaacatttcaacgatactcaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gatctattaaagaaagttcaagaggctttaccagaagaacatttcaacgatactcaaatc 218
Query: 61 caagaacagataagatcgttgaatgctataatgagcgataaatataagaattattatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 caagaacagataagatcgttgaatgctataatgagcgataaatataagaattattatgct 278
Query: 121 gtaggggacaaattatacaagccagcaggtaacccaatttattacaaaagattgcatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gtaggggacaaattatacaagccagcaggtaacccaatttattacaaaagattgcatgac 338
Query: 181 gaaatcgaaggtaagggtaaggaaactttctttacagctatgagaactgtcgtatttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaaatcgaaggtaagggtaaggaaactttctttacagctatgagaactgtcgtatttggt 398
Query: 241 aagtwatttcggtttcagggttttagagcttcgtatgcwtatatgtatatatcatttctg 300
|||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 399 aagtaatttcggtttcagggttttagagcttcgtatgcatatatgtatatatcatttctg 458
Query: 301 tctttttcgtttctagtgtatctgtactgtacaggcctccatacactgactgttaatwat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 459 tctttttcgtttctagtgtatctgtactgtacaggcctccatacactgactgtaaataat 518
Query: 361 ttatattcaatctattctatttattctgtttatctgttgctgataaatgtactattaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttatattcaatctattctatttattctgtttatctgttgctgataaatgtactattaaag 578
Query: 421 cgtagattgttggttccagttccgacctgtgaacgctttgaatttattgattcgcattga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cgtagattgttggttccagttccgacctgtgaacgctttgaatttattgattcgcattga 638
Query: 481 aatgtagaatcatttcttggcgtatccaatctttatcgttacattcttgaatggatgatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aatgtagaatcatttcttggcgtatccaatctttatcgttacattcttgaatggatgatc 698
Query: 541 atgacctaaggtttcaacaactttagtggcatttgctgtagaatcatattcaacaaagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 atgacctaaggtttcaacaactttagtggcatttgctgtagaatcatattcaacaaagca 758
Query: 601 aagatttctgacactgaccaatctaacctctttaaatccatctgagacaaataacttttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aagatttctgacactgaccaatctaacctctttaaatccatctgagacaaataacttttc 818
Query: 661 caattcttgctgagtaacatcttttggaagattttgaaamaatagga 707
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 819 caattcttgctgagtaacatcttttggaagattttgaaccaatagga 865
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6430
Number of Sequences: 1807
Number of extensions: 6430
Number of successful extensions: 151
Number of sequences better than 1.0e-20: 1
length of query: 707
length of database: 10,358,551
effective HSP length: 16
effective length of query: 691
effective length of database: 10,329,639
effective search space: 7137780549
effective search space used: 7137780549
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)